STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79498.1KEGG: tit:Thit_1875 Tn7-like transposition protein C. (554 aa)    
Predicted Functional Partners:
AEM79500.1
PFAM: TnsA endonuclease, N-terminal; TnsA endonuclease C-terminal; KEGG: cow:Calow_2029 tnsa endonuclease.
 
 
 
 0.990
AEM79499.1
PFAM: Integrase, catalytic core; KEGG: cow:Calow_2028 ntegrase catalytic subunit.
 
 
 0.987
AEM79497.1
KEGG: tit:Thit_1874 Tn7-like transposition protein D.
 
   
 0.960
AEM79522.1
S23 ribosomal protein; PFAM: 23S rRNA-associated protein; KEGG: tit:Thit_1901 S23 ribosomal protein.
  
     0.610
AEM78208.1
KEGG: cob:COB47_2236 transposase, IS605 OrfB family; manually curated; PFAM: Transposase, probable, IS891/IS1136/IS1341.
    
   0.589
AEM79962.1
Hypothetical protein; Manually curated; KEGG: ckn:Calkro_0205 transposase, IS605 orfB family.
    
   0.589
AEM79981.1
KEGG: thx:Thet_2398 transposase, IS605 OrfB family; TIGRFAM: Transposase, IS605 OrfB, C-terminal; PFAM: Transposase, IS605 OrfB, C-terminal; Transposase, probable, IS891/IS1136/IS1341.
    
   0.589
AEM79501.1
KEGG: tit:Thit_1878 hypothetical protein.
       0.547
AEM79496.1
KEGG: vei:Veis_1949 hypothetical protein.
       0.429
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.