STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79501.1KEGG: tit:Thit_1878 hypothetical protein. (173 aa)    
Predicted Functional Partners:
AEM79497.1
KEGG: tit:Thit_1874 Tn7-like transposition protein D.
       0.547
AEM79498.1
KEGG: tit:Thit_1875 Tn7-like transposition protein C.
       0.547
AEM79499.1
PFAM: Integrase, catalytic core; KEGG: cow:Calow_2028 ntegrase catalytic subunit.
       0.547
AEM79500.1
PFAM: TnsA endonuclease, N-terminal; TnsA endonuclease C-terminal; KEGG: cow:Calow_2029 tnsa endonuclease.
       0.547
AEM79502.1
Hypothetical protein; KEGG: cow:Calow_2031 u32 family peptidase.
       0.536
AEM79503.1
Helix-turn-helix domain protein; KEGG: tit:Thit_1879 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
       0.448
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.