STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79522.1S23 ribosomal protein; PFAM: 23S rRNA-associated protein; KEGG: tit:Thit_1901 S23 ribosomal protein. (132 aa)    
Predicted Functional Partners:
AEM78634.1
KEGG: tbo:Thebr_1094 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core.
  
 
 0.686
AEM78636.1
KEGG: tmt:Tmath_1113 type II secretion system F domain protein; manually curated; PFAM: Type II secretion system F domain.
  
  
 0.667
AEM79499.1
PFAM: Integrase, catalytic core; KEGG: cow:Calow_2028 ntegrase catalytic subunit.
  
     0.622
AEM78458.1
KEGG: tbo:Thebr_1441 DNA internalization-like competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.614
AEM79498.1
KEGG: tit:Thit_1875 Tn7-like transposition protein C.
  
     0.610
AEM79500.1
PFAM: TnsA endonuclease, N-terminal; TnsA endonuclease C-terminal; KEGG: cow:Calow_2029 tnsa endonuclease.
  
     0.600
AEM79497.1
KEGG: tit:Thit_1874 Tn7-like transposition protein D.
  
     0.573
AEM78827.1
KEGG: tbo:Thebr_1294 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A.
 
  
 0.537
AEM78638.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.481
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.