STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79538.1YbbR family protein; PFAM: YbbR-like; KEGG: thx:Thet_1982 YbbR family protein. (396 aa)    
Predicted Functional Partners:
dacA
Conserved hypothetical protein CHP00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
 
  
 0.983
AEM79540.1
PFAM: Transposase, IS4-like; KEGG: has:Halsa_0720 hypothetical protein.
       0.522
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.499
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
 
     0.493
AEM79536.1
KEGG: tbo:Thebr_0472 phosphate butyryltransferase; TIGRFAM: Phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase.
  
    0.491
buk-3
TIGRFAM: Butyrate kinase; HAMAP: butyrate kinase; KEGG: thx:Thet_1981 butyrate kinase; PFAM: Acetate/butyrate kinase; Belongs to the acetokinase family.
       0.483
AEM79977.1
KEGG: tbo:Thebr_0107 primosome, DnaD subunit; TIGRFAM: DnaD/phage-associated region; PFAM: DnaD/phage-associated region.
 
     0.472
AEM79533.1
KEGG: tbo:Thebr_0475 hypothetical protein.
  
    0.468
AEM79978.1
KEGG: thx:Thet_2395 AAA ATPase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
     0.459
AEM80015.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: tbo:Thebr_2316 hypothetical protein.
  
     0.459
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.