STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79545.1PFAM: Protein of unknown function DUF58; KEGG: thx:Thet_1988 hypothetical protein. (384 aa)    
Predicted Functional Partners:
AEM79544.1
Transglutaminase domain-containing protein; Manually curated; PFAM: Transglutaminase-like; KEGG: thx:Thet_1987 transglutaminase domain-containing protein; SMART: Transglutaminase-like.
 
  
 0.967
AEM79546.1
PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: thx:Thet_1989 ATPase associated with various cellular activities AAA_3.
 
  
 0.944
AEM77900.1
KEGG: tbo:Thebr_1969 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core.
 
  
 0.760
AEM79547.1
KEGG: tbo:Thebr_0461 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
       0.733
AEM79543.1
Hypothetical protein; Manually curated.
  
    0.628
AEM79548.1
TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: Cell wall hydrolase/autolysin, catalytic; KEGG: tbo:Thebr_0460 N-acetylmuramoyl-L-alanine amidase CwlD; SMART: Cell wall hydrolase/autolysin, catalytic.
       0.540
AEM79279.1
KEGG: tmt:Tmath_1709 hypothetical protein.
  
     0.467
AEM79791.1
KEGG: tbo:Thebr_0260 hypothetical protein.
  
     0.434
AEM80002.1
PFAM: Protein of unknown function DUF990; KEGG: tmt:Tmath_0994 protein of unknown function DUF990.
  
     0.427
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.