STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79548.1TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: Cell wall hydrolase/autolysin, catalytic; KEGG: tbo:Thebr_0460 N-acetylmuramoyl-L-alanine amidase CwlD; SMART: Cell wall hydrolase/autolysin, catalytic. (226 aa)    
Predicted Functional Partners:
AEM79702.1
Manually curated; PFAM: Cell wall hydrolase/autolysin, catalytic.
  
  
 
0.921
AEM78157.1
Cell wall hydrolase/autolysin; KEGG: tit:Thit_0595 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Copper amine oxidase-like, N-terminal; SMART: Cell wall hydrolase/autolysin, catalytic.
  
  
 
0.917
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
    
 
 0.907
AEM79549.1
KEGG: tbo:Thebr_0459 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
  
 0.734
AEM77682.1
KEGG: tbo:Thebr_2143 stage II sporulation protein D; TIGRFAM: Sporulation stage II, protein D firmicutes; Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
 0.639
AEM77940.1
Rhomboid family protein; PFAM: Peptidase S54, rhomboid; KEGG: thx:Thet_0375 rhomboid family protein.
  
   0.610
AEM79547.1
KEGG: tbo:Thebr_0461 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
       0.568
AEM79544.1
Transglutaminase domain-containing protein; Manually curated; PFAM: Transglutaminase-like; KEGG: thx:Thet_1987 transglutaminase domain-containing protein; SMART: Transglutaminase-like.
       0.540
AEM79545.1
PFAM: Protein of unknown function DUF58; KEGG: thx:Thet_1988 hypothetical protein.
       0.540
AEM79546.1
PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: thx:Thet_1989 ATPase associated with various cellular activities AAA_3.
       0.536
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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