STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79666.1KEGG: tte:TTE2377 hypothetical protein. (75 aa)    
Predicted Functional Partners:
AEM79667.1
KEGG: tbo:Thebr_0322 germination protein, Ger(X)C family; TIGRFAM: Spore germination GerAC; PFAM: Spore germination GerAC.
       0.785
AEM79668.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0321 GerA spore germination protein.
       0.782
AEM79669.1
KEGG: tbo:Thebr_0320 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
       0.553
AEM79664.1
KEGG: thx:Thet_2109 hypothetical protein.
       0.525
AEM79665.1
KEGG: tbo:Thebr_0324 hypothetical protein.
       0.525
AEM79663.1
PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; KEGG: tbo:Thebr_0326 shikimate/quinate 5-dehydrogenase.
       0.510
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.