STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79685.1KEGG: aoe:Clos_0429 hypothetical protein. (196 aa)    
Predicted Functional Partners:
AEM79686.1
TIGRFAM: Sporulation stage II, protein E; PFAM: Sporulation stage II, protein E C-terminal; KEGG: thx:Thet_2127 protein serine/threonine phosphatase; SMART: Protein phosphatase 2C-related.
 
     0.746
AEM77576.1
KEGG: tbo:Thebr_2239 pro-sigmaK processing inhibitor BofA; TIGRFAM: SigmaK-factor processing regulatory BofA; PFAM: SigmaK-factor processing regulatory BofA.
  
     0.695
AEM79673.1
PFAM: Sodium ion-translocating decarboxylase; KEGG: tbo:Thebr_0316 sodium pump decarboxylase subunit gamma.
 
     0.681
AEM78715.1
KEGG: tbo:Thebr_1175 hypothetical protein.
  
     0.659
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.627
AEM78685.1
KEGG: tbo:Thebr_1145 stage II sporulation protein M; TIGRFAM: Sporulation stage II, protein M; PFAM: Protein of unknown function DUF95, transmembrane.
  
     0.593
AEM78359.1
Protein of unknown function UPF0180; PFAM: Uncharacterised protein family UPF0180; KEGG: tit:Thit_0789 protein of unknown function UPF0180.
  
     0.580
AEM79390.1
KEGG: tbo:Thebr_0542 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
  
     0.572
AEM79683.1
KEGG: tbo:Thebr_0309 hypoxanthine phosphoribosyltransferase; TIGRFAM: Hypoxanthine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.569
AEM79253.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: tbo:Thebr_0640 family 1 extracellular solute-binding protein.
  
     0.536
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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