STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79694.1PFAM: Protein of unknown function DUF1284; KEGG: tit:Thit_2067 protein of unknown function DUF1284. (135 aa)    
Predicted Functional Partners:
AEM79695.1
KEGG: tit:Thit_2068 hypothetical protein.
       0.527
AEM78315.1
PFAM: BioY protein; KEGG: tbo:Thebr_1568 BioY protein.
 
    0.504
AEM77682.1
KEGG: tbo:Thebr_2143 stage II sporulation protein D; TIGRFAM: Sporulation stage II, protein D firmicutes; Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
    0.420
AEM78646.1
KEGG: tbo:Thebr_1106 hypothetical protein.
  
     0.407
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.