STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79725.1KEGG: ckn:Calkro_2507 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (230 aa)    
Predicted Functional Partners:
AEM78915.1
PFAM: Integrase, catalytic core; KEGG: tmt:Tmath_0019 integrase catalytic region.
  
 0.815
AEM79514.1
KEGG: cob:COB47_1659 integrase catalytic region; manually curated; PFAM: Integrase, catalytic core.
  
 0.811
AEM77865.1
PFAM: Integrase, catalytic core; KEGG: chy:CHY_1117 ISChy4, transposase.
  
 0.795
AEM78030.1
KEGG: cob:COB47_1659 integrase catalytic region.
  
 0.781
AEM80013.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.658
AEM79726.1
PFAM: Glycosyl transferase, family 2; KEGG: aoe:Clos_0614 glycosyl transferase family protein.
       0.470
AEM79727.1
PFAM: PBS lyase HEAT-like repeat; KEGG: aoe:Clos_0613 heat repeat-containing PBS lyase.
       0.470
AEM79728.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: bmd:BMD_0935 response regulator diguanylate cyclase/phosphodiesterase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region.
       0.467
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.