STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79758.1KEGG: ttm:Tthe_0301 hypothetical protein. (288 aa)    
Predicted Functional Partners:
AEM79756.1
KEGG: tmt:Tmath_0082 hypothetical protein.
 
     0.955
AEM79755.1
KEGG: tbo:Thebr_0063 type IV secretory pathway VirB4 components-like protein.
 
     0.949
AEM79760.1
PFAM: TRAG protein; KEGG: tmt:Tmath_0078 TraG family protein.
 
     0.920
AEM79761.1
KEGG: tmt:Tmath_0077 hypothetical protein.
 
     0.918
AEM79744.1
KEGG: tbo:Thebr_2259 hypothetical protein.
 
     0.867
AEM79754.1
PFAM: Peptidase M23; KEGG: tmt:Tmath_0084 peptidase M23.
 
     0.829
AEM79757.1
KEGG: tmt:Tmath_0081 hypothetical protein.
       0.802
AEM79749.1
PFAM: Type II secretion system F domain; KEGG: tbo:Thebr_0069 type II secretion system F domain-containing protein.
 
     0.795
AEM79751.1
KEGG: tbo:Thebr_0067 chromosome partitioning ATPase.
 
     0.778
AEM79750.1
PFAM: Type II secretion system protein E; KEGG: tbo:Thebr_2265 type II secretion system protein E.
       0.769
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.