STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEM79760.1PFAM: TRAG protein; KEGG: tmt:Tmath_0078 TraG family protein. (610 aa)    
Predicted Functional Partners:
AEM79761.1
KEGG: tmt:Tmath_0077 hypothetical protein.
 
     0.955
AEM79755.1
KEGG: tbo:Thebr_0063 type IV secretory pathway VirB4 components-like protein.
 
  
 0.947
AEM79758.1
KEGG: ttm:Tthe_0301 hypothetical protein.
 
     0.925
AEM79756.1
KEGG: tmt:Tmath_0082 hypothetical protein.
 
    0.915
AEM79762.1
KEGG: tmt:Tmath_0076 hypothetical protein.
       0.799
AEM79744.1
KEGG: tbo:Thebr_2259 hypothetical protein.
 
     0.785
AEM79759.1
KEGG: toc:Toce_0427 hypothetical protein.
       0.778
AEM79750.1
PFAM: Type II secretion system protein E; KEGG: tbo:Thebr_2265 type II secretion system protein E.
 
   
 0.766
AEM79767.1
KEGG: ttm:Tthe_0293 hypothetical protein.
 
   
 0.753
AEM79749.1
PFAM: Type II secretion system F domain; KEGG: tbo:Thebr_0069 type II secretion system F domain-containing protein.
 
     0.699
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.