STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79802.1Desulfoferrodoxin; KEGG: thx:Thet_2245 desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx. (125 aa)    
Predicted Functional Partners:
AEM78521.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: tbo:Thebr_0998 flavodoxin/nitric oxide synthase.
  
 0.759
AEM79421.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tbo:Thebr_0510 rubredoxin-type Fe(Cys)4 protein.
 
  
 0.753
AEM79817.1
Ferritin Dps family protein; Iron-storage protein.
  
  
 0.702
AEM78015.1
PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: tbo:Thebr_1836 rubrerythrin.
 
  
 0.520
AEM79801.1
Two component transcriptional regulator, winged helix family; KEGG: ere:EUBREC_1613 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region.
  
    0.504
AEM79800.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ctc:CTC01951 alkaline phosphatase synthesis sensor protein PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
       0.470
AEM77768.1
Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: tbo:Thebr_2054 ferric-uptake regulator; Belongs to the Fur family.
     
 0.408
AEM79095.1
Ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; KEGG: thx:Thet_1605 ferric uptake regulator, Fur family.
     
 0.408
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.