STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79829.1KEGG: tit:Thit_2158 hypothetical protein. (213 aa)    
Predicted Functional Partners:
AEM79830.1
KEGG: tit:Thit_2159 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
     0.951
AEM79831.1
KEGG: tmt:Tmath_2079 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
 
    0.946
AEM78715.1
KEGG: tbo:Thebr_1175 hypothetical protein.
  
     0.528
AEM78813.1
PFAM: Flagellar hook-length control protein; KEGG: tbo:Thebr_1280 flagellar hook-length control protein-like, C-terminal domain-containing protein.
  
     0.507
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
  
     0.504
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
  
     0.480
AEM77672.1
PFAM: Protein of unknown function DUF1779; KEGG: tmt:Tmath_0192 protein of unknown function DUF1779.
  
     0.469
AEM77826.1
KEGG: thx:Thet_0285 hypothetical protein.
  
     0.460
AEM77576.1
KEGG: tbo:Thebr_2239 pro-sigmaK processing inhibitor BofA; TIGRFAM: SigmaK-factor processing regulatory BofA; PFAM: SigmaK-factor processing regulatory BofA.
  
     0.458
AEM78913.1
PFAM: Domain of unknown function DUF2357; Protein of unknown function DUF524; KEGG: thx:Thet_1112 hypothetical protein.
  
     0.448
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.