STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79830.1KEGG: tit:Thit_2159 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (290 aa)    
Predicted Functional Partners:
AEM79831.1
KEGG: tmt:Tmath_2079 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
 
  
 0.969
AEM79829.1
KEGG: tit:Thit_2158 hypothetical protein.
 
     0.951
AEM79270.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
 
  
 0.918
AEM77957.1
KEGG: tbo:Thebr_1900 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
 
  
 0.696
AEM79407.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0521 ABC-2 type transporter.
  
 
 0.601
AEM79693.1
KEGG: tit:Thit_2066 hypothetical protein.
  
 
 0.592
AEM79451.1
KEGG: thx:Thet_2276 hypothetical protein.
  
 
 0.562
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.488
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.469
atpG
ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.463
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.