STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79832.1Oligoendopeptidase, pepF/M3 family; KEGG: tte:TTE2488 oligoendopeptidase F; TIGRFAM: Peptidase M3B, oligoendopeptidase-related clade 3; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal. (587 aa)    
Predicted Functional Partners:
AEM79830.1
KEGG: tit:Thit_2159 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
    0.439
AEM79829.1
KEGG: tit:Thit_2158 hypothetical protein.
       0.423
AEM79831.1
KEGG: tmt:Tmath_2079 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
       0.423
AEM78807.1
KEGG: tbo:Thebr_1274 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA).
    
   0.404
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.