STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79873.1PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0200 ABC-2 type transporter. (371 aa)    
Predicted Functional Partners:
AEM79874.1
KEGG: tbo:Thebr_0199 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
  
 0.943
AEM79872.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0201 ABC-2 type transporter.
 
 
0.933
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.624
AEM79266.1
Hypothetical protein; Manually curated; KEGG: tte:TTE1567 hypothetical protein.
  
     0.579
AEM79871.1
KEGG: tbo:Thebr_0202 hypothetical protein.
       0.547
AEM78970.1
PFAM: ABC-2 type transporter; KEGG: ttm:Tthe_1165 ABC-2 type transporter.
 
 
 0.541
AEM77584.1
PFAM: Beta-galactosidase trimerisation; Glycoside hydrolase, family 5; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.539
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.511
AEM79451.1
KEGG: thx:Thet_2276 hypothetical protein.
 
   
 0.496
AEM79382.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
  
     0.493
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.