STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79880.1KEGG: tbo:Thebr_0192 hypothetical protein. (65 aa)    
Predicted Functional Partners:
AEM79881.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_0191 germination protein YpeB.
 
     0.751
AEM79882.1
KEGG: thx:Thet_2319 spore cortex-lytic enzyme; TIGRFAM: Spore cortex-lytic enzyme SleB; PFAM: Cell wall hydrolase, SleB; Peptidoglycan binding-like.
 
     0.740
AEM78480.1
Sporulation protein YqfC; TIGRFAM: Protein of unknown function DUF1429; KEGG: tbo:Thebr_1399 hypothetical protein.
  
     0.598
AEM78860.1
KEGG: tbo:Thebr_1327 sporulation integral membrane protein YlbJ; TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition.
  
     0.577
AEM78684.1
KEGG: tbo:Thebr_1144 hypothetical protein.
  
     0.564
AEM79886.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0186 GerA spore germination protein.
 
     0.556
AEM79000.1
Hypothetical protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
     0.533
AEM79884.1
KEGG: thx:Thet_2321 germination protein, Ger(X)C family; TIGRFAM: Spore germination GerAC; PFAM: Spore germination GerAC.
 
     0.524
AEM79885.1
KEGG: tbo:Thebr_0187 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
 
     0.524
AEM79883.1
KEGG: thx:Thet_2320 stage II sporulation protein R; TIGRFAM: Sporulation stage II, protein R; PFAM: Sporulation stage II, protein R.
 
     0.518
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.