STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79881.1Hypothetical protein; Manually curated; KEGG: tbo:Thebr_0191 germination protein YpeB. (444 aa)    
Predicted Functional Partners:
AEM79882.1
KEGG: thx:Thet_2319 spore cortex-lytic enzyme; TIGRFAM: Spore cortex-lytic enzyme SleB; PFAM: Cell wall hydrolase, SleB; Peptidoglycan binding-like.
 
  
 0.979
AEM79884.1
KEGG: thx:Thet_2321 germination protein, Ger(X)C family; TIGRFAM: Spore germination GerAC; PFAM: Spore germination GerAC.
 
     0.859
AEM79885.1
KEGG: tbo:Thebr_0187 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
 
     0.832
AEM79886.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0186 GerA spore germination protein.
 
    0.812
AEM78340.1
KEGG: tbo:Thebr_1544 cell wall hydrolase SleB; PFAM: Cell wall hydrolase, SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
 
  
 0.788
AEM79883.1
KEGG: thx:Thet_2320 stage II sporulation protein R; TIGRFAM: Sporulation stage II, protein R; PFAM: Sporulation stage II, protein R.
 
     0.772
AEM79667.1
KEGG: tbo:Thebr_0322 germination protein, Ger(X)C family; TIGRFAM: Spore germination GerAC; PFAM: Spore germination GerAC.
 
     0.759
AEM79880.1
KEGG: tbo:Thebr_0192 hypothetical protein.
 
     0.751
AEM79669.1
KEGG: tbo:Thebr_0320 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
 
     0.694
AEM78656.1
KEGG: tbo:Thebr_1116 stage III sporulation protein AB; TIGRFAM: Sporulation stage III, protein AB; PFAM: Sporulation stage III, protein AB.
  
     0.686
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.