STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79884.1KEGG: thx:Thet_2321 germination protein, Ger(X)C family; TIGRFAM: Spore germination GerAC; PFAM: Spore germination GerAC. (383 aa)    
Predicted Functional Partners:
AEM79885.1
KEGG: tbo:Thebr_0187 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
 
  
 0.959
AEM79886.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0186 GerA spore germination protein.
 
  
 0.956
AEM79881.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_0191 germination protein YpeB.
 
     0.859
AEM79883.1
KEGG: thx:Thet_2320 stage II sporulation protein R; TIGRFAM: Sporulation stage II, protein R; PFAM: Sporulation stage II, protein R.
 
     0.809
AEM79668.1
PFAM: Bacillus/Clostridium GerA spore germination protein; KEGG: tbo:Thebr_0321 GerA spore germination protein.
 
  
 0.808
AEM79669.1
KEGG: tbo:Thebr_0320 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
  
 0.802
AEM79882.1
KEGG: thx:Thet_2319 spore cortex-lytic enzyme; TIGRFAM: Spore cortex-lytic enzyme SleB; PFAM: Cell wall hydrolase, SleB; Peptidoglycan binding-like.
 
  
 0.778
AEM79887.1
KEGG: tbo:Thebr_0185 hypothetical protein.
       0.777
AEM78685.1
KEGG: tbo:Thebr_1145 stage II sporulation protein M; TIGRFAM: Sporulation stage II, protein M; PFAM: Protein of unknown function DUF95, transmembrane.
  
     0.757
AEM78675.1
KEGG: tbo:Thebr_1135 stage IV sporulation protein B; TIGRFAM: Peptidase S55, sporulation stage IV, protein B; PFAM: Peptidase S55, SpoIVB.
  
    0.739
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.