STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79897.1KEGG: thx:Thet_2334 hypothetical protein. (122 aa)    
Predicted Functional Partners:
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.839
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.778
AEM78986.1
KEGG: thx:Thet_0948 stage II sporulation protein P; TIGRFAM: Sporulation stage II, protein P; PFAM: Sporulation stage II, protein P.
  
     0.759
AEM78987.1
PFAM: Protein of unknown function DUF1614; KEGG: tbo:Thebr_0854 hypothetical protein.
  
     0.754
AEM77621.1
KEGG: tte:TTE0101 hypothetical protein.
  
     0.697
AEM79895.1
PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: tbo:Thebr_0176 PpiC-type peptidyl-prolyl cis-trans isomerase.
       0.678
AEM78982.1
KEGG: tbo:Thebr_0859 hypothetical protein.
  
     0.652
AEM78983.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_0858 hypothetical protein.
  
     0.641
AEM78464.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1435 hypothetical protein.
  
     0.633
AEM77575.1
KEGG: tbo:Thebr_2240 hypothetical protein.
  
     0.616
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.