STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79962.1Hypothetical protein; Manually curated; KEGG: ckn:Calkro_0205 transposase, IS605 orfB family. (405 aa)    
Predicted Functional Partners:
AEM78207.1
Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: chd:Calhy_0470 transposase IS200-family protein.
 
  
 0.788
AEM79411.1
Resolvase domain-containing protein; KEGG: tte:TTE0741 site-specific integrase-resolvase; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
 
  
 0.731
AEM79498.1
KEGG: tit:Thit_1875 Tn7-like transposition protein C.
    
   0.589
AEM79960.1
KEGG: tmt:Tmath_2210 DNA repair photolyase-like protein.
       0.563
AEM79961.1
KEGG: tmt:Tmath_2211 hypothetical protein.
       0.563
AEM79963.1
KEGG: tit:Thit_2301 hypothetical protein.
 
     0.563
AEM79499.1
PFAM: Integrase, catalytic core; KEGG: cow:Calow_2028 ntegrase catalytic subunit.
    
   0.495
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.482
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.