STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79967.1KEGG: tbo:Thebr_0112 hypothetical protein. (55 aa)    
Predicted Functional Partners:
AEM79968.1
KEGG: tbo:Thebr_0111 HtrA2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
       0.788
rlmH-2
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.764
AEM79630.1
PFAM: Lecithin:cholesterol acyltransferase; KEGG: tbo:Thebr_0357 PGAP1 family protein.
  
     0.719
AEM79975.1
KEGG: tit:Thit_2313 hypothetical protein.
 
     0.651
AEM80016.1
KEGG: tbo:Thebr_2317 hypothetical protein.
  
     0.629
murA-3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.588
AEM79028.1
KEGG: thx:Thet_0909 hypothetical protein.
  
     0.571
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
 
     0.546
AEM79971.1
YycH family protein; PFAM: YycH; KEGG: tit:Thit_2309 YycH family protein.
 
     0.512
AEM79253.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: tbo:Thebr_0640 family 1 extracellular solute-binding protein.
  
     0.498
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.