STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79970.1PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH. (276 aa)    
Predicted Functional Partners:
AEM79971.1
YycH family protein; PFAM: YycH; KEGG: tit:Thit_2309 YycH family protein.
 
  
 0.979
AEM79972.1
KEGG: tmt:Tmath_2220 hypothetical protein.
       0.785
AEM77680.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0166 S-layer-like domain-containing protein.
  
     0.771
AEM78206.1
PFAM: O-antigen ligase-related; Tetratricopeptide TPR-1; KEGG: tmt:Tmath_0704 O-antigen polymerase.
  
     0.750
AEM78953.1
TIGRFAM: Uncharacterised conserved protein UCP02828, putative membrane fusion protein; KEGG: tbo:Thebr_0892 membrane fusion protein.
  
     0.748
AEM78014.1
KEGG: tit:Thit_0459 hypothetical protein.
  
     0.747
AEM79973.1
KEGG: tmt:Tmath_2221 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
 
  
 0.745
AEM77637.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tit:Thit_0105 S-layer domain protein.
  
     0.744
AEM77681.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0167 S-layer-like domain-containing protein.
  
     0.741
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.740
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.