STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79971.1YycH family protein; PFAM: YycH; KEGG: tit:Thit_2309 YycH family protein. (429 aa)    
Predicted Functional Partners:
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
 
  
 0.979
AEM79972.1
KEGG: tmt:Tmath_2220 hypothetical protein.
       0.786
AEM77826.1
KEGG: thx:Thet_0285 hypothetical protein.
  
     0.774
AEM77680.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0166 S-layer-like domain-containing protein.
  
     0.773
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.765
AEM78702.1
KEGG: tbo:Thebr_1160 hypothetical protein.
  
     0.764
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
  
     0.764
AEM78813.1
PFAM: Flagellar hook-length control protein; KEGG: tbo:Thebr_1280 flagellar hook-length control protein-like, C-terminal domain-containing protein.
  
     0.762
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.758
AEM78304.1
PFAM: Protein of unknown function DUF2143; KEGG: tit:Thit_0724 protein of unknown function DUF2143.
  
     0.753
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.