STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79976.1Manually curated; PFAM: Peptidoglycan-binding lysin domain; G5; KEGG: tbo:Thebr_0108 peptidase M23; SMART: Peptidoglycan-binding Lysin subgroup. (451 aa)    
Predicted Functional Partners:
AEM78806.1
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: tbo:Thebr_1273 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); CheC-like protein.
   
   0.685
AEM79977.1
KEGG: tbo:Thebr_0107 primosome, DnaD subunit; TIGRFAM: DnaD/phage-associated region; PFAM: DnaD/phage-associated region.
       0.591
AEM79978.1
KEGG: thx:Thet_2395 AAA ATPase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.591
AEM79975.1
KEGG: tit:Thit_2313 hypothetical protein.
     
 0.530
AEM77825.1
KEGG: tmt:Tmath_0351 penicillin-binding protein, 1A family; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
  
  
 0.447
AEM79549.1
KEGG: tbo:Thebr_0459 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
  
 0.436
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
 
     0.436
AEM79328.1
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.435
AEM78581.1
KEGG: tmt:Tmath_1065 SpoIID/LytB domain protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
 
   
 0.406
murA-3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.405
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.