STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM79977.1KEGG: tbo:Thebr_0107 primosome, DnaD subunit; TIGRFAM: DnaD/phage-associated region; PFAM: DnaD/phage-associated region. (324 aa)    
Predicted Functional Partners:
AEM79978.1
KEGG: thx:Thet_2395 AAA ATPase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
  
 0.958
AEM78323.1
KEGG: tbo:Thebr_1561 hypothetical protein.
  
     0.764
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.721
AEM79891.1
KEGG: tbo:Thebr_0181 peptidoglycan-binding lysin domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
     0.636
AEM78342.1
PFAM: Primosome PriB/single-strand DNA-binding; KEGG: thx:Thet_0747 single-strand-binding protein/primosomal replication protein N.
 
     0.628
AEM80014.1
KEGG: tbo:Thebr_2315 phosphoesterase RecJ domain-containing protein.
 
     0.622
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
    0.599
AEM79976.1
Manually curated; PFAM: Peptidoglycan-binding lysin domain; G5; KEGG: tbo:Thebr_0108 peptidase M23; SMART: Peptidoglycan-binding Lysin subgroup.
       0.591
AEM78646.1
KEGG: tbo:Thebr_1106 hypothetical protein.
  
     0.510
AEM78103.1
KEGG: tbo:Thebr_1771 8-oxoguanine DNA glycosylase domain-containing protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal; HhH-GPD domain; SMART: HhH-GPD domain.
  
     0.509
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.