Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEM79987.1PFAM: PspA/IM30; KEGG: ttm:Tthe_0730 phage shock protein A, PspA. (231 aa)    
Predicted Functional Partners:
AEM79988.1
KEGG: ttm:Tthe_0731 hypothetical protein.
       0.788
AEM78380.1
Phage shock protein C, PspC; PFAM: PspC; KEGG: tbo:Thebr_1510 PspC domain-containing protein.
  
 
 0.742
AEM78923.1
PFAM: PspC; KEGG: tmt:Tmath_1410 phage shock protein C, PspC.
  
 
 0.742
AEM79337.1
Phage shock protein C, PspC; PFAM: PspC; KEGG: tte:TTE0864 putative stress-responsive transcriptional regulator.
  
 
 0.742
AEM77696.1
KEGG: thx:Thet_0156 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SMART: ATPase, AAA+ type, core.
   
 
 0.537
AEM77713.1
KEGG: thx:Thet_0167 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core.
   
 
 0.526
AEM77853.1
KEGG: tit:Thit_0293 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core.
   
 
 0.526
AEM78339.1
KEGG: thx:Thet_0744 sigma 54 interacting domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core.
   
 
 0.526
AEM79294.1
KEGG: toc:Toce_1906 PTS system transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core.
   
 
 0.526
AEM79476.1
PTS system transcriptional activator; KEGG: tbo:Thebr_1996 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; PRD; Phosphotransferase system, fructose subfamily IIA component; SMART: ATPase, AAA+ type, core.
   
 
 0.526
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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