STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM80014.1KEGG: tbo:Thebr_2315 phosphoesterase RecJ domain-containing protein. (130 aa)    
Predicted Functional Partners:
AEM80015.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: tbo:Thebr_2316 hypothetical protein.
 
    0.885
AEM80016.1
KEGG: tbo:Thebr_2317 hypothetical protein.
 
     0.830
AEM79062.1
KEGG: tbo:Thebr_0784 hypothetical protein.
  
     0.751
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.732
AEM78323.1
KEGG: tbo:Thebr_1561 hypothetical protein.
  
     0.703
AEM79039.1
KEGG: thx:Thet_0897 hypothetical protein.
 
     0.693
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.669
AEM79630.1
PFAM: Lecithin:cholesterol acyltransferase; KEGG: tbo:Thebr_0357 PGAP1 family protein.
  
     0.654
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.638
AEM80018.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.623
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.