STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM80016.1KEGG: tbo:Thebr_2317 hypothetical protein. (102 aa)    
Predicted Functional Partners:
AEM80014.1
KEGG: tbo:Thebr_2315 phosphoesterase RecJ domain-containing protein.
 
     0.830
AEM80015.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: tbo:Thebr_2316 hypothetical protein.
 
     0.823
AEM79630.1
PFAM: Lecithin:cholesterol acyltransferase; KEGG: tbo:Thebr_0357 PGAP1 family protein.
  
     0.644
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.638
AEM79967.1
KEGG: tbo:Thebr_0112 hypothetical protein.
  
     0.629
AEM77680.1
S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tte:TTE0166 S-layer-like domain-containing protein.
  
     0.598
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.597
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
  
     0.577
AEM78715.1
KEGG: tbo:Thebr_1175 hypothetical protein.
  
     0.573
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.569
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.