STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM80026.1KEGG: tbo:Thebr_2327 hypothetical protein. (167 aa)    
Predicted Functional Partners:
AEM80025.1
TIGRFAM: Conserved hypothetical protein CHP00147; PFAM: Diacylglycerol kinase, catalytic region; KEGG: tbo:Thebr_2326 diacylglycerol kinase catalytic region; SMART: Diacylglycerol kinase, catalytic region.
 
     0.812
AEM80027.1
KEGG: thx:Thet_2451 cysteine desulfurase family protein; TIGRFAM: Cysteine desulfurase-related, unknown function; PFAM: Aminotransferase, class V/Cysteine desulfurase.
       0.757
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.703
AEM80023.1
KEGG: tbo:Thebr_2324 cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; PFAM: Mur ligase, central; Carbamoyl phosphate synthetase, large subunit, ATP-binding; ATP-grasp fold, RimK-type; Mur ligase, C-terminal; Belongs to the MurCDEF family.
 
    0.684
AEM80024.1
Cyanophycinase; KEGG: tbo:Thebr_2325 cyanophycinase; TIGRFAM: Cyanophycinase; PFAM: Peptidase S51, dipeptidase E.
 
     0.669
polA
5'-3' exonuclease, resolvase-like domain-containing protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.478
gyrB
DNA topoisomerase IV, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
   
 
 0.454
AEM78415.1
TIGRFAM: Cell shape-determining protein MreD; KEGG: tbo:Thebr_1485 rod shape-determining protein MreD.
  
     0.416
AEM78324.1
PFAM: Small acid-soluble spore protein, alpha/beta-type; KEGG: tbo:Thebr_1560 alpha/beta type small acid-soluble spore protein.
  
    0.406
AEM77685.1
KEGG: tbo:Thebr_2140 MreB/Mrl family cell shape determining protein; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl.
 
 
   0.401
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.