STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU21595.1PFAM: Methyltransferase type 11; KEGG: msi:Msm_0028 SAM-dependent methyltransferase. (202 aa)    
Predicted Functional Partners:
ADU20893.1
TIGRFAM: phosphatidylserine decarboxylase; KEGG: cpy:Cphy_1961 phosphatidylserine decarboxylase-related; PFAM: phosphatidylserine decarboxylase-related; Belongs to the phosphatidylserine decarboxylase family.
     
 0.901
ADU20895.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpy:Cphy_1960 CDP-alcohol phosphatidyltransferase.
     
  0.800
ADU21596.1
Regulatory protein ArsR; KEGG: eel:EUBELI_01432 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
     
 0.612
ADU21594.1
PFAM: Heavy metal transport/detoxification protein; KEGG: ere:EUBREC_2969 hypothetical protein.
       0.598
ADU21593.1
KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
       0.475
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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