Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU22402.1PFAM: GCN5-related N-acetyltransferase; KEGG: bay:RBAM_024110 YrkN. (244 aa)    
Predicted Functional Partners:
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
 
 0.571
ADU23360.1
PFAM: peptidase C11 clostripain; KEGG: cth:Cthe_0249 peptidase C11, clostripain.
  
     0.523
ADU20949.1
KEGG: ele:Elen_2438 hypothetical protein.
  
     0.512
ADU22737.1
PFAM: AAA-ATPase-like; protein of unknown function DUF1703; KEGG: ere:EUBREC_2821 hypothetical protein.
  
   
 0.490
ADU23409.1
PFAM: Spore coat protein CotH; KEGG: cpi:Cpin_4911 spore coat protein CotH.
  
     0.464
ADU22174.1
PFAM: TM1410 hypothetical-related protein; KEGG: shi:Shel_22100 hypothetical protein.
  
     0.461
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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