STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU22493.1PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0906 radical SAM family protein. (457 aa)    
Predicted Functional Partners:
ADU22494.1
KEGG: cce:Ccel_0533 hypothetical protein.
 
 
 
 0.984
ADU22491.1
KEGG: vpr:Vpar_0729 hypothetical protein.
       0.773
ADU22492.1
KEGG: fjo:Fjoh_1527 hypothetical protein.
       0.773
ADU23228.1
Arginine decarboxylase; KEGG: mla:Mlab_1037 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase major region.
 
     0.520
ADU20751.1
PFAM: Domain of unknown function DUF1858; KEGG: cth:Cthe_3092 hypothetical protein.
  
     0.481
miaB
RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
     
 0.463
ADU22322.1
KEGG: ctc:CTC00123 DNA replication protein DnaC.
  
     0.410
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.