Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU22494.1KEGG: cce:Ccel_0533 hypothetical protein. (47 aa)    
Predicted Functional Partners:
ADU22493.1
PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0906 radical SAM family protein.
 
 
   0.968
ADU20722.1
PFAM: Radical SAM domain protein; KEGG: cby:CLM_0615 radical SAM domain protein.
 
 
   0.901
ADU22495.1
KEGG: chy:CHY_0936 hypothetical protein.
       0.538
ADU20751.1
PFAM: Domain of unknown function DUF1858; KEGG: cth:Cthe_3092 hypothetical protein.
  
     0.494
ADU22491.1
KEGG: vpr:Vpar_0729 hypothetical protein.
       0.486
ADU22492.1
KEGG: fjo:Fjoh_1527 hypothetical protein.
       0.486
ADU22496.1
KEGG: ate:Athe_0391 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein.
       0.470
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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