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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU22503.1KEGG: cce:Ccel_3330 hypothetical protein. (227 aa)    
Predicted Functional Partners:
ADU23410.1
KEGG: eel:EUBELI_00561 hypothetical protein.
  
     0.751
ADU22023.1
KEGG: ere:EUBREC_2456 hypothetical protein.
  
     0.733
ADU23275.1
KEGG: cce:Ccel_0393 hypothetical protein.
  
     0.689
ADU22505.1
DNA-(apurinic or apyrimidinic site) lyase; PFAM: 8-oxoguanine DNA glycosylase domain-containing protein; KEGG: tpd:Teth39_1728 8-oxoguanine DNA glycosylase domain-containing protein; SMART: HhH-GPD family protein.
       0.612
ADU22504.1
Hypothetical protein; KEGG: dre:378479 major histocompatibility complex class I ZE gene.
       0.557
ADU22968.1
PFAM: protein of unknown function DUF624; KEGG: cce:Ccel_1974 hypothetical protein.
  
     0.544
ADU22506.1
KEGG: lbu:LBUL_1094 hypothetical protein.
       0.532
ADU23488.1
KEGG: cce:Ccel_0298 hypothetical protein.
  
     0.521
ADU23535.1
PFAM: L-fucose isomerase-like-like; KEGG: cbe:Cbei_4681 L-fucose isomerase related protein.
  
     0.481
ADU23443.1
PFAM: Protein of unknown function, membrane YfhO; KEGG: eel:EUBELI_01615 hypothetical protein.
  
     0.479
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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