STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU22505.1DNA-(apurinic or apyrimidinic site) lyase; PFAM: 8-oxoguanine DNA glycosylase domain-containing protein; KEGG: tpd:Teth39_1728 8-oxoguanine DNA glycosylase domain-containing protein; SMART: HhH-GPD family protein. (273 aa)    
Predicted Functional Partners:
ADU22372.1
TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: ere:EUBREC_0501 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase.
  
 0.939
ADU22504.1
Hypothetical protein; KEGG: dre:378479 major histocompatibility complex class I ZE gene.
       0.773
ADU22506.1
KEGG: lbu:LBUL_1094 hypothetical protein.
       0.740
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.652
ADU23702.1
DNA mismatch repair protein MutS domain protein; KEGG: ere:EUBREC_3564 possible adenine-specific DNA methylase; PFAM: DNA mismatch repair protein MutS domain protein; SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
   
 
 0.651
ADU22321.1
TIGRFAM: primosome, DnaD subunit; KEGG: tte:TTE2692 hypothetical protein.
  
     0.629
ADU22503.1
KEGG: cce:Ccel_3330 hypothetical protein.
       0.612
ADU23044.1
Cof-like hydrolase; KEGG: cpr:CPR_0803 HAD-superfamily cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.
      0.536
ADU22322.1
KEGG: ctc:CTC00123 DNA replication protein DnaC.
  
     0.520
ADU22356.1
PFAM: UMUC domain protein DNA-repair protein; KEGG: pru:PRU_0508 ImpB/MucB/SamB family protein.
  
 
 0.501
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.