Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADU23468.1KEGG: dsy:DSY3854 hypothetical protein. (390 aa)    
Predicted Functional Partners:
ADU23469.1
KEGG: dae:Dtox_1979 hypothetical protein.
 
     0.942
ADU23470.1
PFAM: Dockerin type 1; KEGG: mba:Mbar_A1990 cell surface protein.
 
     0.848
ADU23464.1
KEGG: dsy:DSY3852 hypothetical protein.
 
     0.774
ADU23466.1
Hypothetical protein; KEGG: tga:TGAM_1518 MoxR associated protein, containing DUF58 domain.
       0.773
ADU23467.1
KEGG: ere:EUBREC_1422 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase.
       0.773
ADU23462.1
KEGG: ele:Elen_1030 hypothetical protein.
 
     0.761
ADU23465.1
KEGG: tex:Teth514_0930 transglutaminase domain-containing protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein.
       0.746
ADU23463.1
KEGG: dsy:DSY3851 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.738
ADU22058.1
KEGG: dae:Dtox_1979 hypothetical protein.
  
     0.691
ADU22718.1
PFAM: protein of unknown function DUF58; KEGG: cth:Cthe_1182 hypothetical protein.
 
     0.404
Your Current Organism:
Ruminococcus albus 7 DSM 20455
NCBI taxonomy Id: 697329
Other names: R. albus 7 = DSM 20455, Ruminococcus albus 7, Ruminococcus albus 7 = DSM 20455, Ruminococcus albus DSM 20455, Ruminococcus albus DSM 20455 = 7
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