Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADU23498.1 | ADU23499.1 | Rumal_3033 | Rumal_3034 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | KEGG: eca:ECA2119 hypothetical protein. | 0.773 |
| ADU23498.1 | ADU23500.1 | Rumal_3033 | Rumal_3035 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | 0.689 |
| ADU23498.1 | ADU23501.1 | Rumal_3033 | Rumal_3036 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | 0.807 |
| ADU23498.1 | ADU23502.1 | Rumal_3033 | Rumal_3037 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | 0.404 |
| ADU23498.1 | ADU23503.1 | Rumal_3033 | Rumal_3038 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | PFAM: sodium/hydrogen exchanger; KEGG: tde:TDE1965 sodium/hydrogen exchanger family protein. | 0.437 |
| ADU23499.1 | ADU23498.1 | Rumal_3034 | Rumal_3033 | KEGG: eca:ECA2119 hypothetical protein. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.773 |
| ADU23499.1 | ADU23500.1 | Rumal_3034 | Rumal_3035 | KEGG: eca:ECA2119 hypothetical protein. | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | 0.689 |
| ADU23499.1 | ADU23501.1 | Rumal_3034 | Rumal_3036 | KEGG: eca:ECA2119 hypothetical protein. | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | 0.532 |
| ADU23499.1 | ADU23502.1 | Rumal_3034 | Rumal_3037 | KEGG: eca:ECA2119 hypothetical protein. | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | 0.404 |
| ADU23500.1 | ADU23498.1 | Rumal_3035 | Rumal_3033 | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.689 |
| ADU23500.1 | ADU23499.1 | Rumal_3035 | Rumal_3034 | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | KEGG: eca:ECA2119 hypothetical protein. | 0.689 |
| ADU23500.1 | ADU23501.1 | Rumal_3035 | Rumal_3036 | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | 0.593 |
| ADU23500.1 | ADU23502.1 | Rumal_3035 | Rumal_3037 | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | 0.445 |
| ADU23501.1 | ADU23498.1 | Rumal_3036 | Rumal_3033 | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.807 |
| ADU23501.1 | ADU23499.1 | Rumal_3036 | Rumal_3034 | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | KEGG: eca:ECA2119 hypothetical protein. | 0.532 |
| ADU23501.1 | ADU23500.1 | Rumal_3036 | Rumal_3035 | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | 0.593 |
| ADU23501.1 | ADU23502.1 | Rumal_3036 | Rumal_3037 | KEGG: vpr:Vpar_0414 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP. | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | 0.568 |
| ADU23502.1 | ADU23498.1 | Rumal_3037 | Rumal_3033 | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.404 |
| ADU23502.1 | ADU23499.1 | Rumal_3037 | Rumal_3034 | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | KEGG: eca:ECA2119 hypothetical protein. | 0.404 |
| ADU23502.1 | ADU23500.1 | Rumal_3037 | Rumal_3035 | Hypothetical protein; KEGG: cth:Cthe_2271 cellulosome enzyme, dockerin type I. | PFAM: NUDIX hydrolase; KEGG: bhy:BHWA1_01363 putative NUDIX hydrolase. | 0.445 |
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