Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJB41955.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
AJB41956.1
Hypothetical protein.
 
    0.781
AJB41957.1
ABC transporter ATP-binding protein.
 
     0.764
AJB41958.1
Cobalt/nickel ABC transporter ATP-binding protein.
 
     0.709
AJB41952.1
Hypothetical protein.
       0.550
AJB41953.1
N-ethylammeline chlorohydrolase.
       0.550
AJB41954.1
Uridine phosphorylase.
       0.550
vapC-4
PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.532
AJB42350.1
Hypothetical protein.
  
     0.512
AJB41872.1
PilT protein domain protein.
  
     0.456
AJB42855.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Thermofilum adornatus
NCBI taxonomy Id: 697581
Other names: T. adornatus 1505, Thermofilum adornatus 1505
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