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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmB-2Proteasome subunit beta, archaeal; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (205 aa)    
Predicted Functional Partners:
psmB
Proteasome subunit beta, archaeal; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
  
 
0.910
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.892
AJB41916.1
Mov34/MPN/PAD-1.
   
 0.891
psmA
Proteasome subunit alpha, archaeal; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
0.887
rpl40e
LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.812
AJB42701.1
LSU ribosomal protein L15e.
 
  
 0.756
AJB42991.1
Heat shock protein 60 family chaperone GroEL / Thermosome subunit; Belongs to the TCP-1 chaperonin family.
 
 
 0.710
AJB42592.1
Heat shock protein 60 family chaperone GroEL / Thermosome subunit; Belongs to the TCP-1 chaperonin family.
 
 
 0.688
AJB41910.1
HtrA protease/chaperone protein.
    
 0.664
tbp
TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
  
  
 0.644
Your Current Organism:
Thermofilum adornatus
NCBI taxonomy Id: 697581
Other names: T. adornatus 1505, Thermofilum adornatus 1505
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