Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
AJB42944.1Threonine dehydratase. (402 aa)    
Predicted Functional Partners:
AJB42071.1
Threonine synthase.
 
 
0.969
AJB42270.1
Cysteine synthase.
 
 
 0.949
AJB42943.1
Endoribonuclease L-PSP.
  
 
 0.911
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
 0.906
AJB42263.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.891
AJB41172.1
Y4yB.
  
 
 0.854
AJB42748.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
    
 0.837
AJB42897.1
2-ketoisovalerate ferredoxin oxidoreductase, gamma subunit.
    
 0.837
AJB42750.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
    
 0.836
AJB42899.1
2-ketoisovalerate ferredoxin oxidoreductase, alpha subunit.
    
 0.836
Your Current Organism:
Thermofilum adornatus
NCBI taxonomy Id: 697581
Other names: T. adornatus 1505, Thermofilum adornatus 1505
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