Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1V6NR01 | A0A1V6PAN9 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | Uncharacterized protein. | 0.448 |
A0A1V6NR01 | A0A1V6PLH1 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | Hist_deacetyl domain-containing protein. | 0.846 |
A0A1V6NR01 | A0A1V6PLK6 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.757 |
A0A1V6NV75 | A0A1V6PAN9 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.461 |
A0A1V6NV75 | A0A1V6PFM2 | Homeobox domain-containing protein. | MADS-box domain-containing protein. | 0.828 |
A0A1V6NWF2 | A0A1V6PAN9 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.461 |
A0A1V6NWF2 | A0A1V6PFM2 | Homeobox domain-containing protein. | MADS-box domain-containing protein. | 0.828 |
A0A1V6P8G9 | A0A1V6PAN9 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.498 |
A0A1V6P968 | A0A1V6PAN9 | Uncharacterized protein. | Uncharacterized protein. | 0.558 |
A0A1V6P9C5 | A0A1V6PAN9 | Hist_deacetyl domain-containing protein. | Uncharacterized protein. | 0.448 |
A0A1V6P9C5 | A0A1V6PLH1 | Hist_deacetyl domain-containing protein. | Hist_deacetyl domain-containing protein. | 0.830 |
A0A1V6P9C5 | A0A1V6PLK6 | Hist_deacetyl domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.820 |
A0A1V6PAN9 | A0A1V6NR01 | Uncharacterized protein. | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | 0.448 |
A0A1V6PAN9 | A0A1V6NV75 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.461 |
A0A1V6PAN9 | A0A1V6NWF2 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.461 |
A0A1V6PAN9 | A0A1V6P8G9 | Uncharacterized protein. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.498 |
A0A1V6PAN9 | A0A1V6P968 | Uncharacterized protein. | Uncharacterized protein. | 0.558 |
A0A1V6PAN9 | A0A1V6P9C5 | Uncharacterized protein. | Hist_deacetyl domain-containing protein. | 0.448 |
A0A1V6PAN9 | A0A1V6PFM2 | Uncharacterized protein. | MADS-box domain-containing protein. | 0.524 |
A0A1V6PAN9 | A0A1V6PLH1 | Uncharacterized protein. | Hist_deacetyl domain-containing protein. | 0.577 |
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