STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6PAP2MIF4G domain-containing protein. (1542 aa)    
Predicted Functional Partners:
A0A1V6PIT8
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.984
A0A1V6PDC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.960
A0A1V6P9T3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.922
A0A1V6NZK3
Uncharacterized protein.
   
 0.901
A0A1V6PDW6
RRM domain-containing protein.
   
 0.891
A0A1V6PMX9
Uncharacterized protein.
   
 0.891
A0A1V6NRG1
Nuclear cap-binding protein subunit 2.
    
 0.857
A0A1V6NUX9
F-box domain-containing protein.
   
 0.856
A0A1V6P8U9
Uncharacterized protein.
   
 
 0.850
A0A1V6PLP1
W2 domain-containing protein.
   
 0.838
Your Current Organism:
Penicillium decumbens
NCBI taxonomy Id: 69771
Other names: CBS 230.81, FRR 741, NRRL 741, P. decumbens
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