STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6PBY2Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
A0A1V6PQA5
Urb2 domain-containing protein.
  
     0.446
A0A1V6PAT8
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
  
     0.443
A0A1V6PDQ5
Zn(2)-C6 fungal-type domain-containing protein.
  
     0.437
A0A1V6NUI9
Zn(2)-C6 fungal-type domain-containing protein.
  
     0.434
A0A1V6PDD4
Uncharacterized protein.
  
     0.421
A0A1V6PDB0
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
     0.411
A0A1V6PCE1
Uncharacterized protein.
  
     0.409
A0A1V6NS33
Iwr1 domain-containing protein.
  
     0.404
A0A1V6NUX9
F-box domain-containing protein.
  
     0.404
A0A1V6PDD6
Uncharacterized protein.
  
     0.403
Your Current Organism:
Penicillium decumbens
NCBI taxonomy Id: 69771
Other names: CBS 230.81, FRR 741, NRRL 741, P. decumbens
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