Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6PBY3UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)    
Predicted Functional Partners:
A0A1V6PHE6
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.982
A0A1V6NV84
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.980
A0A1V6NUR4
Uncharacterized protein.
   
 0.964
A0A1V6PNH1
Uncharacterized protein.
    
 0.962
A0A1V6PK21
ANAPC5 domain-containing protein.
    
 0.957
A0A1V6P0B0
RING-type domain-containing protein.
    
 0.955
A0A1V6PNH3
DOC domain-containing protein.
    
 0.949
A0A1V6PCB0
Uncharacterized protein.
    
 0.946
A0A1V6PIL0
WD_REPEATS_REGION domain-containing protein.
   
 0.943
A0A1V6PNR6
WD_REPEATS_REGION domain-containing protein.
   
 0.943
Your Current Organism:
Penicillium decumbens
NCBI taxonomy Id: 69771
Other names: CBS 230.81, FRR 741, NRRL 741, P. decumbens
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