STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_0469-t1Ge1_WD40 domain-containing protein. (1155 aa)    
Predicted Functional Partners:
G7K_0082-t1
Nudix hydrolase domain-containing protein.
    
 0.659
G7K_2367-t1
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.593
G7K_2237-t1
WSC domain-containing protein.
    
 0.580
G7K_2500-t1
Uncharacterized protein.
    
 0.580
G7K_3323-t1
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 
 0.565
G7K_3292-t1
Uncharacterized protein.
    
 0.563
G7K_3423-t1
Uncharacterized protein.
    
 0.549
G7K_4646-t1
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.549
G7K_6209-t1
MPN domain-containing protein.
    
  0.549
G7K_2424-t1
Uncharacterized protein.
    
 0.537
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.