STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_0723-t1Uncharacterized protein. (1241 aa)    
Predicted Functional Partners:
G7K_5966-t1
Sas10 domain-containing protein.
   
   0.958
G7K_4576-t1
Uncharacterized protein.
   
 
 0.928
G7K_4708-t1
Nop domain-containing protein.
   
   0.915
G7K_1017-t1
Uncharacterized protein.
   
 
 0.900
G7K_1161-t1
Uncharacterized protein.
   
 
 0.886
G7K_5415-t1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.862
G7K_6460-t1
Uncharacterized protein.
   
 
 0.862
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.861
G7K_2369-t1
U3 small nucleolar RNA-associated protein 22.
   
 
 0.856
G7K_1531-t1
Brix domain-containing protein.
   
    0.844
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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