STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_0672-t1Uncharacterized protein. (825 aa)    
Predicted Functional Partners:
G7K_3607-t1
Uncharacterized protein.
    
 0.971
G7K_5098-t1
RNA helicase.
    
 0.953
G7K_2207-t1
RNA helicase.
    
  0.952
G7K_3864-t1
Uncharacterized protein.
    
 0.952
G7K_2369-t1
U3 small nucleolar RNA-associated protein 22.
   
 
 0.935
G7K_5493-t1
G-patch domain-containing protein.
    
 
 0.935
G7K_4576-t1
Uncharacterized protein.
    
 
 0.933
G7K_0669-t1
Uncharacterized protein.
    
 
 0.932
G7K_1339-t1
S4 RNA-binding domain-containing protein.
    
   0.932
G7K_2710-t1
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
    
   0.932
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.