STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K_0799-t1CNH domain-containing protein. (1127 aa)    
Predicted Functional Partners:
G7K_0035-t1
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.993
G7K_3606-t1
E3 ubiquitin-protein ligase PEP5.
   
 0.992
G7K_2952-t1
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.991
G7K_4608-t1
Pep3_Vps18 domain-containing protein.
   
 0.991
G7K_4858-t1
Protein kinase domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.974
G7K_4629-t1
CNH domain-containing protein.
    
 
0.960
G7K_2161-t1
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.955
G7K_6249-t1
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.954
G7K_3566-t1
Uncharacterized protein.
    
 
 0.935
G7K_3799-t1
Vps8 domain-containing protein.
   
 
 0.934
Your Current Organism:
Saitoella complicata
NCBI taxonomy Id: 698492
Other names: S. complicata NRRL Y-17804, Saitoella complicata CBS 7301, Saitoella complicata CCRC 22490, Saitoella complicata IAM 12963, Saitoella complicata JCM 7358, Saitoella complicata NBRC 10748, Saitoella complicata NRRL Y-17804
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